[DTU] Deprecate insertEdge*/deleteEdge*

Summary: This patch converts all existing `insertEdge*/deleteEdge*` to `applyUpdates` and marks `insertEdge*/deleteEdge*` as deprecated.

Reviewers: kuhar, brzycki

Reviewed By: kuhar, brzycki

Subscribers: hiraditya, llvm-commits

Tags: #llvm

Differential Revision: https://reviews.llvm.org/D58443

llvm-svn: 354652