[ThinLTO] Fix .llvmcmd emission

llvm::EmbedBitcodeInModule needs (what used to be called) EmbedMarker
set, in order to emit .llvmcmd. EmbedMarker is really about embedding the
command line, so renamed the parameter accordingly, too.

This was not caught at test because the check-prefix was incorrect, but
FileCheck does not report that when multiple prefixes are provided. A
separate patch will address that.

Differential Revision: https://reviews.llvm.org/D90278