[Utils] Fix %S substitution
%S refers to the directory of %s, not to the cwd. This is mostly handled correctly, but update_cc_test_checks.py used for the wrong path for non-FileCheck RUN lines.
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%S refers to the directory of %s, not to the cwd. This is mostly handled correctly, but update_cc_test_checks.py used for the wrong path for non-FileCheck RUN lines.